Sequence Similarity Clusters for the Entities in PDB 3PPF

Entity #1 | Chains: A
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase protein, length: 789 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 8719
95 % 8 11 6040 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.5
PDBFlex
90 % 8 11 6084
70 % 8 11 6017
50 % 10 17 3816
40 % 14 26 2088
30 % 14 26 2101

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures