Sequence Similarity Clusters for the Entities in PDB 3PNV

Entity #1 | Chains: A,B
Glutamyl-tRNA synthetase protein, length: 505 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41368
95 % 3 3 16003 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.8
PDBFlex
90 % 3 3 15764
70 % 3 3 15937
50 % 3 3 13348
40 % 3 3 12248
30 % 12 25 1559

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures