Sequence Similarity Clusters for the Entities in PDB 3PIA

Entity #1 | Chains: A,C
Hemoglobin subunit alpha protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 13 2091
95 % 8 13 2680 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 9 18 1747
70 % 170 339 22
50 % 380 733 7
40 % 380 733 7
30 % 414 781 10
Entity #2 | Chains: B,D
Hemoglobin subunit beta protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 13 2096
95 % 9 14 2536 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 9 18 1765
70 % 182 349 18
50 % 381 733 7
40 % 381 733 7
30 % 415 781 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures