Sequence Similarity Clusters for the Entities in PDB 3PGY

Entity #1 | Chains: A,B,C,D
Serine hydroxymethyltransferase protein, length: 415 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 28157
95 % 1 1 22570 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 1 1 23292
70 % 22 40 1456
50 % 32 60 608
40 % 32 60 643
30 % 32 62 585

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures