Sequence Similarity Clusters for the Entities in PDB 3PFI

Entity #1 | Chains: A,B
Holliday junction ATP-dependent DNA helicase ruvB protein, length: 338 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36424
95 % 1 1 29835 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.3
PDBFlex
90 % 1 1 28685
70 % 1 1 26006
50 % 8 11 5669
40 % 8 11 5717
30 % 8 11 5440

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures