Sequence Similarity Clusters for the Entities in PDB 3PBD

Entity #1 | Chains: A
Endothiapepsin protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 475 531 20
95 % 475 531 33 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.2
PDBFlex
90 % 475 531 37
70 % 475 531 44
50 % 483 550 77
40 % 483 558 93
30 % 484 559 90

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures