Sequence Similarity Clusters for the Entities in PDB 3OPU

Entity #1 | Chains: A,B,C,D,E,F
SpaP protein, length: 339 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 13153
95 % 1 1 13875 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.6
PDBFlex
90 % 1 1 13706
70 % 1 1 12167
50 % 4 4 8133
40 % 4 4 7817
30 % 6 8 5116

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures