Sequence Similarity Clusters for the Entities in PDB 3OKR

Entity #1 | Chains: A,B,C,D
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 17275
95 % 3 4 8874 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 3 4 8803
70 % 3 4 8602
50 % 5 6 5577
40 % 5 6 5675
30 % 30 38 1097
Entity #2 | Chains: F
Heptamer peptide protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures