Sequence Similarity Clusters for the Entities in PDB 3OF9

Entity #1 | Chains: A
Cathepsin L1 protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 23 1158
95 % 18 29 1110 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.5
PDBFlex
90 % 19 30 1061
70 % 20 33 924
50 % 94 203 156
40 % 111 241 139
30 % 116 255 137

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2XU3 1 A CATHEPSIN L1 CATALYTIC DOMAIN, RESIDUES 114-333 9606 3.4.22.15 | Details
2 5MAJ 1 A Cathepsin L1 9606 3.4.22.15 | Details
3 5MAE 1 A Cathepsin L1 UNP residues 114-333 9606 3.4.22.15 | Details
4 4X6H 1 A Cathepsin K UNP residues 115-329 9606 3.4.22.38 | Details
5 2XU4 1 A CATHEPSIN L1 CATALYTIC DOMAIN, RESIDUES 114-333 9606 3.4.22.15 | Details
6 5MQY 1 A Cathepsin L1 9606 3.4.22.15 | Details
7 2YJC 1 A CATHEPSIN L1 CATALYTIC DOMAIN, RESIDUES 114-333 9606 3.4.22.15 | Details
8 2YJ2 1 A CATHEPSIN L1 CATALYTIC DOMAIN, RESIDUES 114-333 9606 3.4.22.15 | Details
9 4BS6 1 A, B CATHEPSIN S RESIDUES 116-340 10090 3.4.22.27 | Details
10 4YYU 1 A Ficin isoform C 3494 3.4.22.3 | Details
11 3HHA 1 A, B, C, D Cathepsin L1 Heavy chain and light chain: UNP residues 76-333 9606 3.4.22.15 | Details
12 2YJ8 1 A CATHEPSIN L1 CATALYTIC DOMAIN, RESIDUES 114-333 9606 3.4.22.15 | Details
13 4YYR 1 A Ficin B 3494 3.4.22.3 | Details
14 4BS5 1 A CATHEPSIN S RESIDUES 116-340 10090 3.4.22.27 | Details
15 2YJ9 1 A CATHEPSIN L1 CATALYTIC DOMAIN, RESIDUES 114-333 9606 3.4.22.15 | Details
16 6ASH 1 A Cathepsin K UNP residues 115-329 9606 3.4.22.38 | Details
17 4YYS 1 A, B Ficin isoform B 3494 3.4.22.3 | Details
18 3U8E 1 A Papain-like Cysteine Protease 82528
19 5TDI 1 A Cathepsin K 9606 3.4.22.38 | Details
20 5F02 1 A Cathepsin L1 CATALYTIC DOMAIN, RESIDUES 114-333 9606 3.4.22.15 | Details
21 2YJB 1 A CATHEPSIN L1 CATALYTIC DOMAIN, RESIDUES 114-333 9606 3.4.22.15 | Details
22 4YYW 1 A Ficin isoform D 3494 3.4.22.3 | Details
23 6EZP 1 A Cathepsin L1 9606 3.4.22.15 | Details
24 5A24 1 A DIONAIN-1 MATURE ENZYME 4362
25 2H7J 1 A, B Cathepsin S Cathepsin S 9606 3.4.22.27 | Details
26 2HHN 1 A, B Cathepsin S 9606 3.4.22.27 | Details
27 2CIO 1 A PAPAIN 3649 3.4.22.2 | Details
28 4DMY 1 A, B Cathepsin K unp residues 115-329 9606 3.4.22.38 | Details
29 3P5U 1 A Actinidin 64478 3.4.22.14 | Details
30 2VHS 1 A, B, C, D CATHSILICATEIN EXTENSIVE MUTATIONS, CUSTOM DESIGNED CHIMERA 9606 3.4.22.15 | Details
31 1KHQ 1 A Papain Papain, Residues 134-345 3649 3.4.22.2 | Details
32 3OVX 1 A, B Cathepsin S UNP residues 114-331 9606 3.4.22.27 | Details
33 4YYQ 1 A, B Ficin isoform A 3494 3.4.22.3 | Details
34 2OP3 1 A, B Cathepsin S 9606 3.4.22.27 | Details
35 1PPN 1 A PAPAIN 3649 3.4.22.2 | Details
36 5TUN 1 A Cathepsin K UNP residues 115-329 9606 3.4.22.38 | Details
37 2XU1 1 A, B, C, D CATHEPSIN L1 CATALYTIC DOMAIN, RESIDUES 114-333 9606 3.4.22.15 | Details
38 1IWD 1 A ERVATAMIN B 52861
39 4MZO 1 A, B, C, D, E, F, G, H Cathepsin S RESIDUES 116-340 10090 3.4.22.27 | Details
40 9PAP 1 A PAPAIN 3649 3.4.22.2 | Details
41 4X6J 1 A Cathepsin K UNP RESIDUES 115-329 9606 3.4.22.38 | Details
42 5JA7 1 A, B Cathepsin K 9606 3.4.22.38 | Details
43 2FRQ 1 A, B cathepsin S 9606 3.4.22.27 | Details
44 3O1G 1 A Cathepsin K 9606 3.4.22.38 | Details
45 4P6G 1 A, B, C, D Cathepsin S 9606 3.4.22.27 | Details
46 3KWZ 1 A Cathepsin K UNP residues 115-329 9606 3.4.22.38 | Details
47 4DMX 1 A Cathepsin K unp residues 115-329 9606 3.4.22.38 | Details
48 3KSE 1 A, B, C Cathepsin L1 9606 3.4.22.15 | Details
49 1FH0 1 A, B CATHEPSIN V 9606 3.4.22.43 | Details
50 2NQD 2 B Cathepsin L residues 1-220 9606 3.4.22.15 | Details
51 3KX1 1 A Cathepsin K UNP residues 115-329 9606 3.4.22.38 | Details
52 2ACT 1 A ACTINIDIN PRECURSOR 3625 3.4.22.14 | Details
53 1CVZ 1 A PAPAIN RESIDUES 134-345 3649 3.4.22.2 | Details
54 5QCC 1 A, B Cathepsin S 9606 3.4.22.27 | Details
55 5QBV 1 A, B Cathepsin S 9606 3.4.22.27 | Details
56 2FQ9 1 A, B cathepsin S residues 114-331 9606 3.4.22.27 | Details
57 5QC8 1 A, B Cathepsin S 9606 3.4.22.27 | Details
58 2XU5 1 A CATHEPSIN L1 CATALYTIC DOMAIN, RESIDUES 114-333 9606 3.4.22.15 | Details
59 1PPO 1 A PROTEASE OMEGA 3649 3.4.22.30 | Details
60 3O0U 1 A Cathepsin K UNP Residues 115-329 9606 3.4.22.38 | Details
61 3N3G 1 A, B Cathepsin S 9606 3.4.22.27 | Details
62 1YAL 1 A CHYMOPAPAIN THE ACTIVE SITE CYS 25 AS WELL AS CYS 117 ARE PROTECTED WITH A THIOMETHYL GROUP 3649 3.4.22.6 | Details
63 1AEC 1 A ACTINIDIN 3625 3.4.22.14 | Details
64 1PIP 1 A PAPAIN 3649 3.4.22.2 | Details
65 2FT2 1 A, B cathepsin S 9606 3.4.22.27 | Details
66 4BQV 1 A, B, C, D, E, F, G, H CATHEPSIN S RESIDUES 116-340 10090 3.4.22.27 | Details
67 6QBS 1 A, B Cathepsin K 9606 3.4.22.38 | Details
68 5JH3 1 A Cathepsin K 9606 3.4.22.38 | Details
69 1MEM 1 A Cathepsin K 9606 3.4.22.38 | Details
70 1TU6 1 A, B Cathepsin K cathepsin K: mature form (residues 115-329) 9606 3.4.22.38 | Details
71 2HH5 1 A, B Cathepsin S 9606 3.4.22.27 | Details
72 4P6E 1 A, B Cathepsin S 9606 3.4.22.27 | Details
73 3C9E 1 A Cathepsin K 9606 3.4.22.38 | Details
74 4YVA 1 A Cathepsin K UNP residues 115-329 9606 3.4.22.38 | Details
75 3E1Z 2 B Papain 3649 3.4.22.2 | Details
76 3IOQ 1 A CMS1MS2 35926
77 5QC7 1 A, B Cathepsin S 9606 3.4.22.27 | Details
78 6OKJ 1 A, B Ananain 4615 3.4.22.31 | Details
79 1MS6 1 A Cathepsin S 9606 3.4.22.27 | Details
80 5QC9 1 A, B Cathepsin S 9606 3.4.22.27 | Details
81 5QCD 1 A Cathepsin S 9606 3.4.22.27 | Details
82 3P5V 1 A Actinidin 64478 3.4.22.14 | Details
83 2R6N 1 A Cathepsin K 9606 3.4.22.38 | Details
84 1NQC 1 A Cathepsin S 9606 3.4.22.27 | Details
85 1PPD 1 A 2-HYDROXYETHYL-THIOPAPAIN 3649 3.4.22.2 | Details
86 2PNS 1 A, B Ervatamin-C, a papain-like plant cysteine protease 52861 3.4.22 | Details
87 4X6I 1 A Cathepsin K UNP RESIDUES 115-329 9606 3.4.22.38 | Details
88 1O0E 1 A, B Ervatamin C 52861 3.4.22 | Details
89 4YYV 1 A Ficin isoform C 3494 3.4.22.3 | Details
90 5QC3 1 A, B Cathepsin S 9606 3.4.22.27 | Details
91 4N8W 1 A Cathepsin K 9606 3.4.22.38 | Details
92 5QC4 1 A, B Cathepsin S 9606 3.4.22.27 | Details
93 2F7D 1 A Cathepsin K 9986 3.4.22.38 | Details
94 3OF9 1 A Cathepsin L1 Cathepsin L 9606 3.4.22.15 | Details
95 3H8B 1 A, B, C, D, E, F Cathepsin L1 Cathepsin L Heavy Chain and Light Chain, UNP residues 114-333 9606 3.4.22.15 | Details
96 3F75 1 A Cathepsin L Protease UNP residues 199-422 5811 3.4.22.15 | Details
97 2F1G 1 A, B Cathepsin S Cathepsin S 9606 3.4.22.27 | Details
98 4BSQ 1 A CATHEPSIN S CATHEPSIN S, RESIDUES 116-340 10090 3.4.22.27 | Details
99 2R9M 1 A, B Cathepsin S 9606 3.4.22.27 | Details
100 1PPP 1 A PAPAIN 3649 3.4.22.2 | Details
101 4AXL 1 A CATHEPSIN L1 CATALYTIC, RESIDUES 114-333 9606 3.4.22.15 | Details
102 5QC6 1 A, B Cathepsin S 9606 3.4.22.27 | Details
103 4YV8 1 A Cathepsin K UNP residues 115-329 9606 3.4.22.38 | Details
104 3KFQ 1 A, B Cathepsin L2 9606 3.4.22.43 | Details
105 3KW9 1 A Cathepsin K UNP residues 115 to 329 9606 3.4.22.38 | Details
106 2FUD 1 A, B cathepsin S 9606 3.4.22.27 | Details
107 1S4V 1 A, B cysteine endopeptidase 3988
108 1PE6 1 A PAPAIN 3649 3.4.22.2 | Details
109 2R9N 1 A, B Cathepsin S 9606 3.4.22.27 | Details
110 5QCF 1 A Cathepsin S 9606 3.4.22.27 | Details
111 2R9O 1 A, B Cathepsin S 9606 3.4.22.27 | Details
112 1KHP 1 A Papain Papain, Residues 134-345 3649 3.4.22.2 | Details
113 4MZS 1 A, B Cathepsin S RESIDUES 116-340 10090 3.4.22.27 | Details
114 5QCJ 1 A, B, C Cathepsin S 9606 3.4.22.27 | Details
115 5QC0 1 A, B Cathepsin S 9606 3.4.22.27 | Details
116 3IMA 1 A, C Papain Papain domain 3649 3.4.22.2 | Details
117 6MIS 1 A, B Ananain 4615 3.4.22.31 | Details
118 1NPZ 1 A, B Cathepsin S 9606 3.4.22.27 | Details
119 1MEG 1 A CARICAIN 3649 3.4.22.30 | Details
120 2HXZ 1 A, B, C Cathepsin S 9606 3.4.22.27 | Details
121 2FRA 1 A, B cathepsin S residues 114 - 331 9606 3.4.22.27 | Details
122 1U9X 1 A Cathepsin K 9606 3.4.22.38 | Details
123 2BDL 1 A Cathepsin K mature form of cathepsin K (residues 115-329) 9606 3.4.22.38 | Details
124 2ATO 1 A Cathepsin K 9606 3.4.22.38 | Details
125 2G7Y 1 A, B Cathepsin S 9606 3.4.22.27 | Details
126 5QCI 1 A Cathepsin S 9606 3.4.22.27 | Details
127 2BDZ 1 A, B, C, D Mexicain 309130 3.4.22 | Details
128 5QC2 1 A, B Cathepsin S 9606 3.4.22.27 | Details
129 3KWB 1 X, Y Cathepsin K full length 9606 3.4.22.38 | Details
130 6F06 1 A, B Cathepsin L1 9606 3.4.22.15 | Details
131 1VSN 1 A Cathepsin K cathepsin K 9606 3.4.22.38 | Details
132 5QBX 1 A, B Cathepsin S 9606 3.4.22.27 | Details
133 4BPV 1 A, B, C, D, E, K CATHEPSIN S RESIDUES 116-340 10090 3.4.22.27 | Details
134 1U9V 1 A Cathepsin K 9606 3.4.22.38 | Details
135 6H8T 1 A, J Papain Cysteine 25 is covalently bound to a Ruthenium complex. Tyr 61 and 67 are hydroxylated. 3649 3.4.22.2 | Details
136 3P5X 1 A Actinidin 64478 3.4.22.14 | Details
137 1GEC 1 E GLYCYL ENDOPEPTIDASE 3649 3.4.22.25 | Details
138 5QC1 1 A, B Cathepsin S 9606 3.4.22.27 | Details
139 1Q6K 1 A Cathepsin K 9606 3.4.22.38 | Details
140 3P5W 1 A Actinidin 64478 3.4.22.14 | Details
141 3N4C 1 A, B Cathepsin S UNP residues 115 to 331 9606 3.4.22.27 | Details
142 5QBY 1 A, B Cathepsin S 9606 3.4.22.27 | Details
143 3BC3 1 A, B Cathepsin L heavy and light chains UNp residues 114-333 9606 3.4.22.15 | Details
144 3H6S 1 A, B, C, D Cathepsin L2 9606 3.4.22.43 | Details
145 3IEJ 1 A, B Cathepsin S JNJ27120509 9606 3.4.22.27 | Details
146 1U9W 1 A Cathepsin K 9606 3.4.22.38 | Details
147 3H7D 1 A, E Cathepsin K UNP residues 115-329 9606 3.4.22.38 | Details
148 1BP4 1 A PAPAIN ALDEHYDE INHIBITOR COVALENTLY BOUND TO ACTIVE SITE CYS 25 AS A HEMIMERCAPTAL. BOND OCCURS BETWEEN CYS 25-SG AND ALD 213-C22 NON 3649 3.4.22.2 | Details
149 1CQD 1 A, B, C, D PROTEIN (PROTEASE II) TETRATHIONATE ATTACHED TO CYS-27 94328
150 1GLO 1 A CATHEPSIN S 9606 3.4.22.27 | Details
151 3OF8 1 A Cathepsin L1 residues 113-333 9606 3.4.22.15 | Details
152 5QCB 1 A, B Cathepsin S 9606 3.4.22.27 | Details
153 5QCA 1 A, B Cathepsin S 9606 3.4.22.27 | Details
154 5QCH 1 A, B, C, D Cathepsin S 9606 3.4.22.27 | Details
155 1YT7 1 A Cathepsin K sequence database residues 115-329 9606 3.4.22.38 | Details
156 3IV2 1 A, B Cathepsin L1 Mature protein: UNP residues 114-333 9606 3.4.22.15 | Details
157 3OVZ 1 A Cathepsin K UNP residues 121-329 9606 3.4.22.38 | Details
158 2FYE 1 A cathepsin S preproprotein 9606 3.4.22.27 | Details
159 1AYU 1 A CATHEPSIN K INHIBITOR COVALENTLY BOUND TO ACTIVE SITE CYS 25 9606 3.4.22.38 | Details
160 2AUZ 1 A Cathepsin K mature form of cathepsin K (residues 115-329) 9606 3.4.22.38 | Details
161 1ATK 1 A CATHEPSIN K INHIBITOR E-64 COVALENT LINK BETWEEN INHIBITOR ATOM C2 AND THE SULFUR OF CYS 25 9606 3.4.22.38 | Details
162 5J94 1 A Cathepsin K 9606 3.4.22.38 | Details
163 5QC5 1 A, B Cathepsin S 9606 3.4.22.27 | Details
164 1STF 1 E PAPAIN 3649 3.4.22.2 | Details
165 1AYV 1 A CATHEPSIN K INHIBITOR COVALENTLY BOUND TO ACTIVE SITE CYS 25 9606 3.4.22.38 | Details
166 2AUX 1 A Cathepsin K mature form of cathepsin K (residues 115-329) 9606 3.4.22.38 | Details
167 1YK7 1 A Cathepsin K mature form of cathepsin K (sequence database residues 115-329) 9606 3.4.22.38 | Details
168 1SNK 1 A Cathepsin K 9606 3.4.22.38 | Details
169 1AU3 1 A CATHEPSIN K INHIBITOR COVALENTLY BOUND TO ACTIVE SITE CYS 25 9606 3.4.22.38 | Details
170 2G6D 1 A cathepsin S 9606 3.4.22.27 | Details
171 6EZX 1 A, B Cathepsin L1 9606 3.4.22.15 | Details
172 6HGY 1 A Cathepsin K CATALYTIC DOMAIN 9606 3.4.22.38 | Details
173 1BGO 1 A CATHEPSIN K INHIBITOR COVALENTLY BOUND TO ACTIVE SITE CYS 25 9606 3.4.22.38 | Details
174 3K24 1 A, B Cathepsin L1 mC25A: UNP residues 114-333 9606 3.4.22.15 | Details
175 5QBW 1 A Cathepsin S 9606 3.4.22.27 | Details
176 1BQI 1 A PAPAIN METHOXYMETHYLKETONE BOUND NON-COVALENTLY IN S'-SUBSITE 3649 3.4.22.2 | Details
177 3H89 1 A, B, C, D, E, F Cathepsin L1 Cathepsin L Heavy Chain and Light Chain, UNP residues 114-333 9606 3.4.22.15 | Details
178 1AYW 1 A CATHEPSIN K INHIBITOR COVALENTLY BOUND TO ACTIVE SITE CYS 25 9606 3.4.22.38 | Details
179 5QCG 1 A, B Cathepsin S 9606 3.4.22.27 | Details
180 2PRE 1 A, B Ervatamin-C 52861 3.4.22 | Details
181 5QBZ 1 A Cathepsin S 9606 3.4.22.27 | Details
182 3LFY 1 A, C Papain Papain DOMAIN 3649 3.4.22.2 | Details
183 5QBU 1 A, B Cathepsin S 9606 3.4.22.27 | Details
184 1AU4 1 A CATHEPSIN K INHIBITOR COVALENTLY BOUND TO ACTIVE SITE CYS 25 9606 3.4.22.38 | Details
185 1AU0 1 A CATHEPSIN K INHIBITOR COVALENTLY BOUND TO ACTIVE SITE CYS 25 9606 3.4.22.38 | Details
186 4AXM 1 A, B, F, I, L, O CATHEPSIN L1 CATALYTIC, RESIDUES 114-333 9606 3.4.22.15 | Details
187 1YK8 1 A Cathepsin K sequence database residues 115-329 9606 3.4.22.38 | Details
188 5QCE 1 A, B Cathepsin S 9606 3.4.22.27 | Details
189 3H8C 1 A, B Cathepsin L1 Cathepsin L Heavy Chain and Light Chain, UNP residues 114-333 9606 3.4.22.15 | Details
190 2FTD 1 A, B Cathepsin K 9544 3.4.22.38 | Details
191 1NLJ 1 A, B CATHEPSIN K 9606 3.4.22.38 | Details
192 4N79 1 A Cathepsin K 9606 3.4.22.38 | Details
193 1AU2 1 A CATHEPSIN K INHIBITOR COVALENTLY BOUND TO ACTIVE SITE CYS 25 9606 3.4.22.38 | Details
194 6BKI 1 A, B Cathepsin K 10090 3.4.22.38 | Details
195 5T6U 1 A Cathepsin K 10090 3.4.22.38 | Details
196 3BCN 1 A, B Ervatamin-A 52861 3.4.22 | Details
197 1NL6 1 A, B Cathepsin K 9606 3.4.22.38 | Details
198 1POP 1 A PAPAIN 3649 3.4.22.2 | Details
199 1PAD 1 A PAPAIN 3649 3.4.22.2 | Details
200 2PAD 1 A PAPAIN 3649 3.4.22.2 | Details
201 4PAD 1 A PAPAIN 3649 3.4.22.2 | Details
202 5PAD 1 A PAPAIN 3649 3.4.22.2 | Details
203 6PAD 1 A PAPAIN 3649 3.4.22.2 | Details