Sequence Similarity Clusters for the Entities in PDB 3ODU

Entity #1 | Chains: A,B
C-X-C chemokine receptor type 4, Lysozyme Chimera protein, length: 502 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16714
95 % 1 6 7960 Flexibility: Medium
Max RMSD: 14.2, Avg RMSD: 8.1
PDBFlex
90 % 1 6 7934
70 % 1 6 7775
50 % 11 52 1010
40 % 14 65 826
30 % 48 136 421

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures