Sequence Similarity Clusters for the Entities in PDB 3ODI

Entity #1 | Chains: A,C,E,G,I,K,M,O,Q,S
Cyclophilin A protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 97 120 177
95 % 111 139 205 Flexibility: No
Max RMSD: 2.2, Avg RMSD: 0.5
PDBFlex
90 % 111 139 217
70 % 176 206 155
50 % 204 244 133
40 % 204 246 152
30 % 204 246 156
Entity #2 | Chains: B,D,F,H,J,L,N,P,R,T
Voclosporin protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures