Sequence Similarity Clusters for the Entities in PDB 3OB0

Entity #1 | Chains: K,L
Fab 2G12, light chain protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 18 962
95 % 13 18 1324 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 0.6
PDBFlex
90 % 544 761 2
70 % 1713 2276 2
50 % 2135 2893 2
40 % 2135 2893 2
30 % 4332 5868 1
Entity #2 | Chains: H,M
Fab 2G12, heavy chain protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 16 1157
95 % 13 17 1518 Flexibility: Low
Max RMSD: 12.9, Avg RMSD: 1.5
PDBFlex
90 % 13 18 1334
70 % 2059 2790 1
50 % 2168 2933 1
40 % 2168 2933 1
30 % 4333 5868 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures