Sequence Similarity Clusters for the Entities in PDB 3OAZ

Entity #1 | Chains: H,M
Fab 2G12, heavy chain protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 16 1157
95 % 1 17 1518 Flexibility: Low
Max RMSD: 12.9, Avg RMSD: 1.5
PDBFlex
90 % 1 18 1334
70 % 208 2790 1
50 % 225 2933 1
40 % 225 2933 1
30 % 440 5868 1
Entity #2 | Chains: K,L
Fab 2G12, light chain protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 18 962
95 % 1 18 1324 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 0.6
PDBFlex
90 % 49 761 2
70 % 167 2276 2
50 % 211 2893 2
40 % 211 2893 2
30 % 441 5868 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures