Sequence Similarity Clusters for the Entities in PDB 3OAU

Entity #1 | Chains: H
Fab 2G12, heavy chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 80065
95 % 5 17 1508 Flexibility: Low
Max RMSD: 12.9, Avg RMSD: 1.5
PDBFlex
90 % 5 18 1328
70 % 582 2773 1
50 % 616 2914 1
40 % 616 2914 1
30 % 1218 5831 1
Entity #2 | Chains: L
Fab 2G12, light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 18 925
95 % 5 18 1306 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 0.6
PDBFlex
90 % 110 500 4
70 % 469 2262 2
50 % 593 2875 2
40 % 593 2875 2
30 % 1219 5831 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures