Sequence Similarity Clusters for the Entities in PDB 3O9P

Entity #1 | Chains: A
Periplasmic murein peptide-binding protein protein, length: 519 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52752
95 % 2 2 23966 Flexibility: Medium
Max RMSD: 6.5, Avg RMSD: 4.7
PDBFlex
90 % 2 2 23163
70 % 2 2 21037
50 % 2 2 18097
40 % 31 39 1137
30 % 33 41 1067

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures