Sequence Similarity Clusters for the Entities in PDB 3O9P

Entity #1 | Chains: A
Periplasmic murein peptide-binding protein protein, length: 519 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52429
95 % 2 2 21967 Flexibility: Medium
Max RMSD: 6.5, Avg RMSD: 4.7
PDBFlex
90 % 2 2 21331
70 % 2 2 19581
50 % 2 2 17004
40 % 31 39 1064
30 % 33 42 965

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures