Sequence Similarity Clusters for the Entities in PDB 3O8O

Entity #1 | Chains: A,C,E,G
6-phosphofructokinase subunit alpha protein, length: 787 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 28519
95 % 1 1 23038 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 1 1 22358
70 % 1 1 20496
50 % 1 2 9747
40 % 6 11 1828
30 % 6 11 1848
Entity #2 | Chains: B,D,F,H
6-phosphofructokinase subunit beta protein, length: 766 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 28518
95 % 1 1 21645 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 1 1 22357
70 % 1 1 19425
50 % 2 2 9747
40 % 7 11 1828
30 % 7 11 1848

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4U1R 1 A, B, C, D ATP-dependent 6-phosphofructokinase, platelet type UNP residues 26-762 9606 2.7.1.11 | Details
2 4RH3 1 A, B, C, D ATP-dependent 6-phosphofructokinase, platelet type UNP residues 26-762 9606 2.7.1.11 | Details
3 4XZ2 1 A, B, C, D ATP-dependent 6-phosphofructokinase, platelet type N- and C- terminal truncated mutant 25 residues were removed from the N-terminus 22 residues were removed from the C-terminus 1-25 Expression Tag UNP residues 26-762 9606 2.7.1.11 | Details
4 4WL0 1 A, B, C, D ATP-dependent 6-phosphofructokinase, platelet type truncated humane platelet Pfk plasmid start: mas N-terminal Strep-tag: wshpqfek linker: ga EK-site: ddddk restriction site: vpdpts N-terminal start: aigvl N-terminal start: aa 26 C-terminal end: aa 762 UNP residues 26-762 9606 2.7.1.11 | Details
5 4XYJ 1 A, B, C, D, E, F, G, H ATP-dependent 6-phosphofructokinase, platelet type 9606 2.7.1.11 | Details
6 3O8O 1 A, C, E, G 6-phosphofructokinase subunit alpha 4932 2.7.1.11 | Details
7 3O8O 2 B, D, F, H 6-phosphofructokinase subunit beta 4932 2.7.1.11 | Details
8 3O8N 1 A, B 6-phosphofructokinase, muscle type 9986 2.7.1.11 | Details
9 3O8L 1 A, B 6-phosphofructokinase, muscle type 9986 2.7.1.11 | Details
10 4XYK 1 A, B, C, D ATP-dependent 6-phosphofructokinase, platelet type 9606 2.7.1.11 | Details
11 4OMT 1 A 6-phosphofructokinase, muscle type UNP residues 8-755 9606 2.7.1.11 | Details