Sequence Similarity Clusters for the Entities in PDB 3O8O

Entity #1 | Chains: A,C,E,G
6-phosphofructokinase subunit alpha protein, length: 787 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 28243
95 % 1 1 22853 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 1 1 22216
70 % 1 1 20343
50 % 1 2 9965
40 % 6 11 1797
30 % 6 11 1823
Entity #2 | Chains: B,D,F,H
6-phosphofructokinase subunit beta protein, length: 766 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20597
95 % 1 1 19248 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 1 1 20966
70 % 1 1 19278
50 % 2 2 9965
40 % 7 11 1797
30 % 7 11 1823

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures