Sequence Similarity Clusters for the Entities in PDB 3O4X

Entity #1 | Chains: A,B,C,D
Protein diaphanous homolog 1 protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 8023
95 % 2 3 8339 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 2.1
PDBFlex
90 % 2 3 8984
70 % 2 3 7817
50 % 2 3 7353
40 % 2 3 7103
30 % 2 3 6675
Entity #2 | Chains: E,F,G,H
Protein diaphanous homolog 1 protein, length: 467 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 10035
95 % 2 2 11068 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 2 2 10779
70 % 2 2 10490
50 % 2 2 9571
40 % 2 2 9204
30 % 3 3 7636

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures