Sequence Similarity Clusters for the Entities in PDB 3NYB

Entity #1 | Chains: A
Poly(A) RNA polymerase protein 2 protein, length: 323 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71552
95 % 1 1 51302
90 % 1 1 48615
70 % 1 1 42532
50 % 1 1 36838
40 % 1 1 33267
30 % 1 1 29341
Entity #2 | Chains: B
Protein AIR2 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67833
95 % 1 1 51304
90 % 1 1 48617
70 % 1 1 42534
50 % 1 1 36840
40 % 1 1 33268
30 % 1 1 29342

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures