Sequence Similarity Clusters for the Entities in PDB 3NCE

Entity #1 | Chains: A
Prolactin protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41125
95 % 1 12 6657 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.0
PDBFlex
90 % 1 12 7037
70 % 1 12 7069
50 % 1 13 5971
40 % 1 13 5672
30 % 1 13 5401
Entity #2 | Chains: B
Prolactin receptor protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 30992
95 % 1 10 7587 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.5
PDBFlex
90 % 1 10 7575
70 % 1 13 4696
50 % 1 13 4563
40 % 1 13 4469
30 % 1 13 4349

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures