Sequence Similarity Clusters for the Entities in PDB 3N2K

Entity #1 | Chains: A,C
Tubulin alpha chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 12 2073
95 % 146 262 13 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.0
PDBFlex
90 % 146 265 15
70 % 148 281 13
50 % 148 281 18
40 % 296 562 3
30 % 302 573 8
Entity #2 | Chains: B,D
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 13 2214
95 % 146 260 14 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 147 273 8
70 % 149 281 12
50 % 149 281 17
40 % 297 562 3
30 % 303 573 8
Entity #3 | Chains: E
Stathmin-4 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 104 104 418
95 % 117 118 456 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 0.9
PDBFlex
90 % 117 118 482
70 % 117 118 521
50 % 117 118 545
40 % 117 118 586
30 % 117 118 603

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures