Sequence Similarity Clusters for the Entities in PDB 3MZK

Entity #1 | Chains: A,D
Protein transport protein SEC13 protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 4686
95 % 2 12 3923 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 2 12 3979
70 % 2 12 3959
50 % 2 15 2375
40 % 2 15 2401
30 % 2 15 2410
Entity #2 | Chains: B,C
Protein transport protein SEC16 protein, length: 441 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47363
95 % 1 1 43093 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 31442
70 % 1 1 36136
50 % 1 1 31341
40 % 1 1 22493
30 % 1 1 25126

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures