Sequence Similarity Clusters for the Entities in PDB 3MM0

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,K,M,N
Avidin, Avidin-related protein 4/5 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 4212
95 % 2 3 4610 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 11 12 1917
70 % 38 41 505
50 % 40 43 515
40 % 42 45 531
30 % 189 195 119

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1Y55 1 X, Y Avidin-related protein 4/5 9031
2 2OF8 1 A, B Avidin-related protein 4/5 9031
3 2FHL 1 A, B Avidin-related protein 4/5 9031
4 2OFB 1 A, B Avidin-related protein 4/5 9031
5 1Y53 1 X, Y Avidin-related protein 4/5 9031
6 2FHN 1 X, Y Avidin-related protein 4/5 9031
7 2OF9 1 A, B Avidin-related protein 4/5 9031
8 1WBI 1 A, B, C, D, E, F, G, H AVIDIN-RELATED PROTEIN 2 9031
9 1VYO 1 A, B AVIDIN 9031
10 2OFA 1 A, B Avidin-related protein 4/5 9031
11 3VGW 1 A, B, C, D, E, F, G, H Avidin UNP residues 25-147 9031
12 1Y52 1 X, Y Avidin-related protein 4/5 9031
13 3VHI 1 A, B, C, D Avidin UNP residues 26-147 9031
14 4BCS 1 A, B CHIMERIC AVIDIN 9031
15 1NQN 1 A, B Avidin 9031
16 5MYQ 1 A, B, C, D Avidin 9031
17 4JHQ 1 A, B Avidin 9031
18 4U46 1 A, B Avidin OmpA signal was used in expression. UNP residues 25-152 9031
19 3VHM 1 A, B, C, D Avidin UNP residues 25-147 9031
20 1IJ8 1 A, B AVIDIN 9031
21 5CHK 1 A Avidin UNP residues 25-152 9031
22 1RAV 1 A, B AVIDIN 9031
23 5IRW 1 A, B, C, D Avidin 9031
24 5IRU 1 A, B, C, D Avidin 9031
25 2CAM 1 A, B AVIDIN 9031
26 1LDO 1 A, B avidin 9031
27 2A8G 1 A, B Avidin 9031
28 3VHH 1 A, B, C, D Avidin UNP residues 25-147 9031
29 4I60 1 A Avidin 9031
30 1AVD 1 A, B AVIDIN 9031
31 5HLM 1 A, B, C, D Avidin 9031
32 1AVE 1 A, B AVIDIN 9031
33 5LUR 1 A, B Avidin 9031
34 2AVI 1 A, B AVIDIN 9031
35 2A5B 1 A, B Avidin 9031
36 2A5C 1 A, B Avidin 9031
37 1LDQ 1 A, B Avidin 9031
38 3MM0 1 A, B, C, D, E, F, G, H, I, K, M, N Avidin, Avidin-related protein 4/5 SEE REMARK 999 FOR CHIMERA ASSEMBLY INFORMATION P02701 Residues 25-61, 85-152 and P56734 residues 62-82 9031
39 1LEL 1 A, B Avidin 9031
40 3FDC 1 A, B Avidin 9031
41 2MF6 1 A, B, C, D Avidin, Avidin-related protein 4/5 chimera of Avidin and Avidin-related protein 4/5 P02701 Residues 25-61, 85-152 and P56734 residues 62-82 9031