Sequence Similarity Clusters for the Entities in PDB 3MM0

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,K,M,N
Avidin, Avidin-related protein 4/5 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 4172
95 % 2 3 4562 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 11 12 1882
70 % 38 41 489
50 % 40 43 514
40 % 42 45 527
30 % 189 195 113

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures