Sequence Similarity Clusters for the Entities in PDB 3MK4

Entity #1 | Chains: A
Peroxisomal biogenesis factor 3 protein, length: 334 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 80737
95 % 1 2 32215 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.4
PDBFlex
90 % 1 2 36238
70 % 1 2 27784
50 % 1 2 24323
40 % 1 2 22182
30 % 1 2 19837
Entity #2 | Chains: B
Peroxisomal biogenesis factor 19 protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 80736
95 % 1 1 53830
90 % 1 1 50925
70 % 1 1 42897
50 % 1 1 36758
40 % 1 1 33485
30 % 1 1 29565

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures