Sequence Similarity Clusters for the Entities in PDB 3MEG

Entity #1 | Chains: A
p66 Reverse transcriptase protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 13 5216
95 % 185 292 110 Flexibility: Medium
Max RMSD: 23.5, Avg RMSD: 3.7
PDBFlex
90 % 185 292 116
70 % 185 292 127
50 % 186 293 149
40 % 186 294 162
30 % 186 294 166
Entity #2 | Chains: B
p51 Reverse transcriptase protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 12 5987
95 % 180 286 115 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.5
PDBFlex
90 % 180 286 120
70 % 180 286 132
50 % 181 287 156
40 % 181 288 169
30 % 181 288 174

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures