3M8Q

HIV-1 RT with AMINOPYRIMIDINE NNRTI


Sequence Similarity Clusters for the Entities in PDB 3M8Q

Entity #1 | Chains: A
Reverse transcriptase/ribonuclease H protein, length: 561 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 40 62 715
95 % 151 305 106
90 % 151 305 115
70 % 151 305 126
50 % 152 306 141
40 % 152 307 159
30 % 152 307 165
Entity #2 | Chains: B
p51 RT protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 58 863
95 % 147 299 114
90 % 147 299 121
70 % 147 299 133
50 % 148 300 150
40 % 148 301 166
30 % 148 301 173

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures