Sequence Similarity Clusters for the Entities in PDB 3M1B

Entity #1 | Chains: A,C,E,G
IgG receptor FcRn large subunit p51 protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 13 1779
95 % 4 6 5541 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 4 6 5591
70 % 4 6 5530
50 % 6 9 3932
40 % 6 9 3883
30 % 897 906 12
Entity #2 | Chains: B,D,F,H
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 705 716 2
95 % 753 765 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 0.9
PDBFlex
90 % 771 783 3
70 % 1073 1086 4
50 % 1097 1110 4
40 % 1097 1110 5
30 % 1097 1110 8
Entity #3 | Chains: I,J
DIMERIC PEPTIDE INHIBITOR protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures