Sequence Similarity Clusters for the Entities in PDB 3LVF

Entity #1 | Chains: O,P,Q,R
Glyceraldehyde-3-phosphate dehydrogenase 1 protein, length: 338 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 2275
95 % 1 14 1135 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 1 14 1172
70 % 4 30 510
50 % 15 171 68
40 % 15 174 77
30 % 15 174 85

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures