Sequence Similarity Clusters for the Entities in PDB 3L94

Entity #1 | Chains: A
Acyl-homoserine lactone acylase pvdQ subunit alpha protein, length: 170 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 16 3747
95 % 10 17 4306 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 10 17 4372
70 % 10 17 4324
50 % 10 17 4213
40 % 10 17 4124
30 % 11 20 2416
Entity #2 | Chains: B
Acyl-homoserine lactone acylase pvdQ subunit beta protein, length: 546 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 16 3954
95 % 10 17 4392 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 10 17 4450
70 % 10 17 4402
50 % 10 17 4301
40 % 10 17 4205
30 % 11 20 2436

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures