3KT5

Crystal Structure of N88S mutant HIV-1 Protease


Sequence Similarity Clusters for the Entities in PDB 3KT5

Entity #1 | Chains: A
Protease protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 80100
95 % 2 10 9384
90 % 10 22 3643
70 % 10 24 3254
50 % 10 24 3248
40 % 10 24 3236
30 % 10 24 3200

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3KA2 1 A [L-Ala51;Gly51']HIV-1 protease 11685 3.4.23.16 | Details
2 3HZC 1 A [Gly51;Aib51'] 'covalent dimer' HIV-1 protease 11676 3.4.23.16 | Details
3 3HLO 1 A 'covalent dimer' [Gly51/D-Ala51'] HIV-1 protease 11685 3.4.23.16 | Details
4 3NXE 1 A protease covalent dimer covalent dimer HIV-1 protease 11676 3.4.23.16 | Details
5 3FSM 1 A COVALENT DIMER [L-Ala51, D-Ala51'] HIV-1 PROTEASE 11685 3.4.23.16 | Details
6 3IAW 1 A [Gly51;Aib51'] 'covalent dimer' HIV-1 protease 11685 3.4.23.16 | Details
7 3KT2 1 A Protease The fusion protein of two same subunits (UNP residues 489-587) and linker peptide GGSSG. Two subunits are linked through the linker. 11676 3.4.23.16 | Details
8 2O40 1 A covalent dimer HIV-1 protease 11676 3.4.23.16 | Details
9 4EPJ 1 A protease, tethered dimer 11676 3.4.23.16 | Details
10 3KT5 1 A Protease The fusion protein of two same subunits (UNP residues 489-587) and linker peptide GGSSG. Two subunits are linked through the linker. 11676
11 2WHH 1 A POL PROTEIN 5 RESIDUE PEPTIDE LINK BETWEEN C TERMINUS OF FIRST SUB-UNIT AND THE N TERMINUS OF THE SECOND SUB-UNIT OF THE DIMER TO PRODUCE A TETHERED DIMER OF HIV-1 PROTEASE (ALSO SEE REMARK 999) RESIDUES 7-105 11676 3.4.23.16 | Details
12 3GI0 1 A, B COVALENT DIMER [L-ALA51,D-ALA51'] HIV-1 PROTEASE 9606 3.4.23.16 | Details
13 4EP3 1 A protease, tethered dimer 11676 3.4.23.16 | Details
14 3NXN 1 A protease covalent dimer 11685 3.4.23.16 | Details
15 4Q5M 1 A Protease CHIMERA PROTEIN WITH LINKER GLY-GLY-SER-SER-GLY (NUMBERED A100 TO A104) THAT COVALENTLY LINK SUB-UNIT A WITH SUB-UNIT B IN THE TETHERED DIMER. 11676 3.4.23.16 | Details
16 1G6L 1 A HIV-1 PROTEASE TETHERED DIMER LINKED BY GGSSG 11676 3.4.23.16 | Details
17 4EP2 1 A protease, tethered dimer 11676 3.4.23.16 | Details
18 3DOX 1 A HIV-1 PROTEASE TETHERED DIMER LINKED BY GGSSG 11676 3.4.23.16 | Details
19 1LV1 1 A HIV-1 protease Tethered dimer linked by GGSSG 11676 3.4.23.16 | Details
20 4QLH 1 A Protease, linker, Protease Protease-linker-Protease UNP residues 489-587,UNP residues 489-587 32630 3.4.23.16 | Details
21 3N3I 1 A Protease Chimera protein with LINKER Gly-Gly-Ser-Ser-Gly (numbered A100 to A104) that covalently link sub-unit A with sub-unit B in the tethered dimer. UNP residues 489-587 11676 3.4.23.16 | Details
22 1HVC 1 A HIV-1 PROTEASE 11676