Sequence Similarity Clusters for the Entities in PDB 3KOJ

Entity #1 | Chains: A,B
uncharacterized protein ycf41 protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51234
95 % 1 1 33598 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 32180
70 % 1 1 28806
50 % 1 1 25241
40 % 1 1 22960
30 % 1 1 20497

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures