3KLA

Ca2+ release from the endoplasmic reticulum of NY-ESO-1 specific T cells is modulated by the affinity of T cell receptor and by the use of the CD8 co-receptor


Sequence Similarity Clusters for the Entities in PDB 3KLA

Entity #1 | Chains: A,D
HLA class I histocompatibility antigen, A-2 alpha chain protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 245 53
95 % 45 311 63
90 % 53 375 31
70 % 129 907 6
50 % 130 921 7
40 % 134 987 8
30 % 134 1002 14
Entity #2 | Chains: B,E
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 123 814 2
95 % 137 861 2
90 % 138 884 3
70 % 144 920 5
50 % 154 1226 3
40 % 154 1226 4
30 % 154 1226 9
Entity #3 | Chains: C,F
NYESO-1 peptide analogue protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures