Sequence Similarity Clusters for the Entities in PDB 3K1R

Entity #1 | Chains: A
Harmonin protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58415
95 % 1 2 24837 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 1 2 24001
70 % 1 2 21810
50 % 1 2 18747
40 % 1 2 16552
30 % 1 2 13871
Entity #2 | Chains: B
Usher syndrome type-1G protein protein, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58416
95 % 1 1 47791
90 % 1 1 45375
70 % 1 1 39848
50 % 1 2 18748
40 % 1 2 16553
30 % 1 2 13872

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures