Sequence Similarity Clusters for the Entities in PDB 3K1R

Entity #1 | Chains: A
Harmonin protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59638
95 % 1 2 25489 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 1 2 24604
70 % 1 2 22280
50 % 1 2 19152
40 % 1 2 16914
30 % 1 2 14183
Entity #2 | Chains: B
Usher syndrome type-1G protein protein, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59639
95 % 1 1 48791
90 % 1 1 46294
70 % 1 1 40621
50 % 1 2 19153
40 % 1 2 16915
30 % 1 2 14184

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures