Sequence Similarity Clusters for the Entities in PDB 3J5Q

Entity #1 | Chains: B,D,E,G
Transient receptor potential cation channel subfamily V member 1 protein, length: 598 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 1784
95 % 6 7 1984
90 % 6 7 2032
70 % 6 7 2040
50 % 7 8 1757
40 % 7 8 1766
30 % 7 8 1715
Entity #2 | Chains: A,C,F,H
Double-knot toxin protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.