Sequence Similarity Clusters for the Entities in PDB 3J5Q

Entity #1 | Chains: B,D,E,G
Transient receptor potential cation channel subfamily V member 1 protein, length: 598 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 1876
95 % 6 7 2071
90 % 6 7 2122
70 % 6 7 2133
50 % 7 8 1832
40 % 7 8 1842
30 % 7 8 1783
Entity #2 | Chains: A,C,F,H
Double-knot toxin protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures