Sequence Similarity Clusters for the Entities in PDB 3J5P

Entity #1 | Chains: A,B,C,D
Transient receptor potential cation channel subfamily V member 1 protein, length: 598 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 2241
95 % 5 7 2130
90 % 5 7 2183
70 % 5 7 2196
50 % 9 11 1725
40 % 9 11 1713
30 % 9 11 1686

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures