Sequence Similarity Clusters for the Entities in PDB 3IYK

Entity #1 | Chains: A,B,C,D,E,F
VP5 protein, length: 526 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 12372
95 % 2 2 12272
90 % 2 2 12102
70 % 2 2 11503
50 % 2 2 11145
40 % 2 2 10493
30 % 2 2 9685
Entity #2 | Chains: G,I,K
VP2 protein, length: 600 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 33610
95 % 1 1 28044
90 % 1 1 27067
70 % 1 1 24537
50 % 1 1 21569
40 % 1 1 19756
30 % 1 1 17697

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures