Sequence Similarity Clusters for the Entities in PDB 3IRT

Entity #1 | Chains: A,B
Ubiquitin carboxyl-terminal hydrolase isozyme L1 protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 31091
95 % 5 8 6584 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 5 8 6604
70 % 5 8 6855
50 % 8 11 4734
40 % 8 11 4611
30 % 11 14 3247

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures