Sequence Similarity Clusters for the Entities in PDB 3IR1

Entity #1 | Chains: A,B,C,D,E,F
Outer membrane lipoprotein GNA1946 protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 15374
95 % 4 5 2847 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.6
PDBFlex
90 % 4 5 2933
70 % 4 5 2982
50 % 4 5 2970
40 % 4 5 2975
30 % 16 20 1569

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures