Sequence Similarity Clusters for the Entities in PDB 3IBJ

Entity #1 | Chains: A,B
cGMP-dependent 3',5'-cyclic phosphodiesterase protein, length: 691 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40044
95 % 1 1 32058 Flexibility: Medium
Max RMSD: 3.0, Avg RMSD: 3.0
PDBFlex
90 % 1 1 30809
70 % 1 1 27750
50 % 1 1 24294
40 % 1 1 22149
30 % 1 1 19746

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures