3HTT

The hemagglutinin structure of an avian H1N1 influenza A virus in complex with 2,3-sialyllactose


Sequence Similarity Clusters for the Entities in PDB 3HTT

Entity #1 | Chains: A
Hemagglutinin protein, length: 324 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 24416
95 % 1 9 4261 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 12 29 839
70 % 31 70 269
50 % 116 184 92
40 % 254 391 15
30 % 254 391 22
Entity #2 | Chains: B
Hemagglutinin HA2 chain protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 20929
95 % 12 28 848 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 1.3
PDBFlex
90 % 28 61 269
70 % 118 185 58
50 % 249 377 13
40 % 249 377 18
30 % 254 388 24

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures