Sequence Similarity Clusters for the Entities in PDB 3HHA

Entity #1 | Chains: A,B,C,D
Cathepsin L1 protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 11097
95 % 8 29 1134 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.5
PDBFlex
90 % 8 30 1082
70 % 8 33 958
50 % 11 209 155
40 % 17 247 133
30 % 17 261 137

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures