Sequence Similarity Clusters for the Entities in PDB 3H5C

Entity #1 | Chains: A
Protein Z-dependent protease inhibitor protein, length: 423 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 56024
95 % 4 4 21445 Flexibility: Medium
Max RMSD: 9.3, Avg RMSD: 6.5
PDBFlex
90 % 4 4 20855
70 % 5 5 16576
50 % 5 5 14557
40 % 5 5 13551
30 % 5 5 12068
Entity #2 | Chains: B
Vitamin K-dependent protein Z protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69489
95 % 1 1 59856
90 % 1 1 56408
70 % 1 1 49097
50 % 1 1 42353
40 % 1 1 38253
30 % 1 1 33702

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures