Sequence Similarity Clusters for the Entities in PDB 3GUD

Entity #1 | Chains: A,B
Neck appendage protein protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57516
95 % 1 1 40231 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.1
PDBFlex
90 % 1 1 32764
70 % 1 1 35621
50 % 1 1 30908
40 % 1 1 27974
30 % 1 1 24769

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures