Sequence Similarity Clusters for the Entities in PDB 3GOV

Entity #1 | Chains: A
MASP-1 protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 33761
95 % 1 2 28701 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.4
PDBFlex
90 % 1 2 27682
70 % 1 2 25136
50 % 1 2 22106
40 % 2 5 7936
30 % 3 6 6993
Entity #2 | Chains: B
MASP-1 protein, length: 251 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 30159
95 % 1 2 26929 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.6
PDBFlex
90 % 1 2 26028
70 % 1 2 23712
50 % 1 2 19842
40 % 1 2 19083
30 % 1767 1920 5

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures