Sequence Similarity Clusters for the Entities in PDB 3GIY

Entity #1 | Chains: A
(S)-mandelate dehydrogenase, Peroxisomal (S)-2-hydroxy-acid oxidase protein, length: 380 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 20957
95 % 3 7 12365 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 3 8 9142
70 % 3 8 8901
50 % 3 8 8355
40 % 32 69 757
30 % 32 79 508

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures