Sequence Similarity Clusters for the Entities in PDB 3G9K

Entity #1 | Chains: D,L
Capsule biosynthesis protein capD protein, length: 323 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 31723
95 % 1 2 27796 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 1 2 26826
70 % 1 2 24330
50 % 1 2 21376
40 % 1 2 19551
30 % 13 25 1773
Entity #2 | Chains: F,S
Capsule biosynthesis protein capD protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 31722
95 % 1 2 27795 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 1 2 26825
70 % 1 2 24329
50 % 1 2 21375
40 % 1 2 19550
30 % 17 35 1395

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures