Sequence Similarity Clusters for the Entities in PDB 3G5V

Entity #1 | Chains: A
806 light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 35607
95 % 2 29 1456 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.8
PDBFlex
90 % 3 31 1383
70 % 684 2368 2
50 % 865 3003 2
40 % 865 3003 2
30 % 1775 6095 1
Entity #2 | Chains: B
808 heavy chain protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 70747
95 % 1 3 19977 Flexibility: Medium
Max RMSD: 4.8, Avg RMSD: 3.2
PDBFlex
90 % 2 6 10065
70 % 845 2903 1
50 % 897 3048 1
40 % 897 3048 1
30 % 1776 6095 1
Entity #3 | Chains: C
Epidermal Growth Factor Receptor peptide protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures