Sequence Similarity Clusters for the Entities in PDB 3FPU

Entity #1 | Chains: A
Evasin-1 protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 15605
95 % 2 3 15143 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.3
PDBFlex
90 % 2 3 14909
70 % 2 3 14069
50 % 2 3 12737
40 % 2 3 11880
30 % 2 3 10838
Entity #2 | Chains: B
C-C motif chemokine 3 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 74008
95 % 1 11 1106 Flexibility: Low
Max RMSD: 5.9, Avg RMSD: 1.0
PDBFlex
90 % 1 11 1131
70 % 1 11 1161
50 % 2 19 900
40 % 3 20 897
30 % 3 20 931

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures