Sequence Similarity Clusters for the Entities in PDB 3EM6

Entity #1 | Chains: A,B
Protease protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 15599
95 % 10 12 1735 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 569 711 2
70 % 603 753 5
50 % 613 779 5
40 % 613 779 6
30 % 613 779 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4QJA 1 A, B Protease 11676 3.4.23.16 | Details
2 4QJ6 1 A, B, C, D Protease 11676 3.4.23.16 | Details
3 3OXX 1 A, B, C, D HIV-1 PROTEASE 11676 3.4.23.16 | Details
4 4QJ7 1 A, B, C, D Protease 11676 3.4.23.16 | Details
5 3OXV 1 A, B, C, D HIV-1 Protease 11676 3.4.23.16 | Details
6 4QJ9 1 A, B Protease 11676 3.4.23.16 | Details
7 3OXW 1 A, B, C, D HIV-1 Protease 11676 3.4.23.16 | Details
8 4QJ8 1 A, B, C, D Protease 11676 3.4.23.16 | Details
9 3EM4 1 A, B, U, V Protease UNP residues 491-589 11676 3.4.23.16 | Details
10 3EM6 1 A, B Protease UNP residues 491-589 11676 3.4.23.16 | Details
11 4QJ2 1 A, B, C, D Protease 11676
12 3EM3 1 A, B Protease UNP residues 491-589 11676 3.4.23.16 | Details